Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase subunit alpha | PSDVSF_29810 | Q934F5 | Negative | 3161437 - 3164469 | 112189.0 |
| hypothetical protein | PSDVSF_29820 | Not Available | Negative | 3164496 - 3164729 | 8246.83 |
| dde transposase | PSDVSF_29830 | O86236 | Negative | 3164930 - 3165835 | 34963.3 |
| formate dehydrogenase accessory protein fdhe | PSDVSF_29840 | O67150 | Negative | 3165853 - 3166740 | 32804.3 |
| sulfurtransferase fdhd | PSDVSF_29850 | P39756 | Negative | 3166973 - 3167752 | 28909.8 |
| peptidase m20 | PSDVSF_29860 | P06621 | Negative | 3167869 - 3169023 | 40744.6 |
| hypothetical protein | PSDVSF_29870 | O34903 | Negative | 3169352 - 3169756 | 14726.8 |
| two-component sensor histidine kinase | PSDVSF_29880 | Q8X614 | Positive | 3170336 - 3172054 | 63168.6 |
| response regulator | PSDVSF_29890 | Q8Z333 | Positive | 3172047 - 3172478 | 15727.2 |
| two-component system response regulator | PSDVSF_29900 | P0AFU4 | Positive | 3172503 - 3172889 | 14033.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
