Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose abc transporter substrate-binding protein | PSDVSF_29710 | P45047 | Negative | 3149348 - 3150370 | 35839.2 |
| sugar kinase | PSDVSF_29720 | Q44406 | Positive | 3150963 - 3152177 | 44293.5 |
| xylose isomerase 2 | PSDVSF_29730 | Q4UNZ4 | Positive | 3152234 - 3153541 | 48418.1 |
| xylulokinase | PSDVSF_29740 | P44401 | Positive | 3153600 - 3155099 | 52102.1 |
| hypothetical protein | PSDVSF_29750 | Q73B22 | Positive | 3155371 - 3155895 | 19011.2 |
| hypothetical protein | PSDVSF_29760 | P65689 | Positive | 3155908 - 3156495 | 21027.5 |
| hypothetical protein | PSDVSF_29770 | P24072 | Negative | 3156501 - 3157217 | 26142.4 |
| histidine kinase | PSDVSF_29780 | A5W4E3 | Negative | 3157214 - 3159226 | 74969.4 |
| lipoprotein | PSDVSF_29790 | Q1MDE9 | Negative | 3159223 - 3160473 | 46084.0 |
| formate dehydrogenase subunit beta | PSDVSF_29800 | Q727P4 | Negative | 3160696 - 3161424 | 27054.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
