Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | PSDVSF_29410 | Q84WV9 | Negative | 3118286 - 3119071 | 29743.8 |
| tetr family transcriptional regulator | PSDVSF_29420 | Q88FX7 | Negative | 3119200 - 3119829 | 23397.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | PSDVSF_29430 | Q316F5 | Positive | 3119959 - 3120807 | 30857.4 |
| hypothetical protein | PSDVSF_29440 | Not Available | Positive | 3120926 - 3121087 | 6272.39 |
| hypothetical protein | PSDVSF_29450 | Not Available | Positive | 3121185 - 3121547 | 13282.0 |
| cyclic pyranopterin monophosphate synthase | PSDVSF_29460 | C6C060 | Positive | 3121551 - 3122558 | 37268.3 |
| (fe-s)-binding protein | PSDVSF_29470 | Not Available | Negative | 3122773 - 3123573 | 28796.4 |
| hypothetical protein | PSDVSF_29480 | Not Available | Negative | 3123934 - 3127608 | 135132.0 |
| two-component sensor histidine kinase | PSDVSF_29490 | O31661 | Positive | 3128137 - 3129870 | 64050.9 |
| response regulator | PSDVSF_29500 | P03029 | Positive | 3129908 - 3130339 | 15713.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
