Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nifu family protein | PSDVSF_29310 | O32119 | Positive | 3108051 - 3108278 | 8220.19 |
| glutamate--trna ligase | PSDVSF_29320 | Q3A413 | Positive | 3108319 - 3109716 | 52399.7 |
| hypothetical protein | PSDVSF_29330 | P29720 | Negative | 3110695 - 3111171 | 17984.6 |
| hypothetical protein | PSDVSF_29340 | Not Available | Negative | 3111221 - 3111991 | 30235.1 |
| two-component sensor histidine kinase | PSDVSF_29350 | P14377 | Negative | 3112009 - 3113430 | 53396.9 |
| glucose-6-phosphate isomerase | PSDVSF_29360 | Q1ASN4 | Negative | 3113435 - 3114775 | 48674.5 |
| dna repair protein rada | PSDVSF_29370 | Q1RJR7 | Negative | 3115018 - 3116340 | 47041.0 |
| branched-chain amino acid transporter azlc | PSDVSF_29380 | P76630 | Positive | 3116552 - 3117247 | 24509.4 |
| membrane protein | PSDVSF_29390 | Not Available | Positive | 3117240 - 3117569 | 11995.5 |
| lyse family translocator | PSDVSF_29400 | Not Available | Positive | 3117619 - 3118242 | 21933.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
