Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidine deaminase | PSDVSF_29210 | P32393 | Negative | 3097635 - 3098093 | 17037.7 |
| hypothetical protein | PSDVSF_29220 | Not Available | Negative | 3098246 - 3098452 | 7114.4 |
| zinc resistance-associated protein | PSDVSF_29230 | Q725P0 | Positive | 3098738 - 3099274 | 18690.6 |
| hypothetical protein | PSDVSF_29240 | Not Available | Positive | 3099433 - 3100254 | 29953.7 |
| pas domain-containing sensor histidine kinase | PSDVSF_29250 | Q9APE0 | Positive | 3100261 - 3102111 | 68049.8 |
| sigma-54-dependent fis family transcriptional regulator | PSDVSF_29260 | P25852 | Positive | 3102108 - 3103499 | 50912.4 |
| hypothetical protein | PSDVSF_29270 | Not Available | Negative | 3103508 - 3104683 | 45287.1 |
| mbl fold hydrolase | PSDVSF_29280 | P54501 | Positive | 3104746 - 3105372 | 23272.2 |
| histidine porin | PSDVSF_29290 | Q88FY7 | Positive | 3105450 - 3106673 | 45763.4 |
| hypothetical protein | PSDVSF_29300 | O83112 | Positive | 3106841 - 3107908 | 39288.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
