Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional protein pyrr | PSDVSF_28910 | A5D172 | Positive | 3072018 - 3072560 | 20528.7 |
| shikimate kinase | PSDVSF_28920 | B2V895 | Positive | 3072562 - 3073098 | 19611.6 |
| hypothetical protein | PSDVSF_28930 | Not Available | Positive | 3073095 - 3073697 | 22968.2 |
| hypothetical protein | PSDVSF_28940 | Not Available | Negative | 3074102 - 3074458 | 13323.7 |
| hypothetical protein | PSDVSF_28950 | P54458 | Positive | 3074636 - 3075478 | 31102.6 |
| hypothetical protein | PSDVSF_28960 | Not Available | Negative | 3075524 - 3076357 | 31912.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | PSDVSF_28970 | A1V9L9 | Positive | 3076500 - 3077567 | 36502.9 |
| hypothetical protein | PSDVSF_28980 | Not Available | Negative | 3077681 - 3077878 | 7089.41 |
| hypothetical protein | PSDVSF_28990 | Not Available | Negative | 3078013 - 3078273 | 9802.72 |
| porphobilinogen deaminase | PSDVSF_29000 | C6BYB7 | Negative | 3078281 - 3079213 | 33574.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
