Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | PSDVSF_28810 | P21627 | Positive | 3062460 - 3063347 | 31701.3 |
| branched-chain amino acid abc transporter permease | PSDVSF_28820 | P30296 | Positive | 3063350 - 3064396 | 37410.9 |
| branched-chain amino acid abc transporter substrate-binding protein | PSDVSF_28830 | Q2YLF8 | Positive | 3064490 - 3065719 | 44041.6 |
| abc transporter atp-binding protein | PSDVSF_28840 | P21630 | Positive | 3065901 - 3066701 | 29462.8 |
| phenylacetate--coa ligase | PSDVSF_28850 | Q72K16 | Positive | 3066752 - 3068056 | 47925.3 |
| isochorismatase | PSDVSF_28860 | G2X4M1 | Negative | 3068242 - 3068889 | 23297.7 |
| hypothetical protein | PSDVSF_28870 | Q44540 | Negative | 3069146 - 3069460 | 10764.6 |
| hypothetical protein | PSDVSF_28880 | Q44540 | Negative | 3070267 - 3070608 | 11527.5 |
| hypothetical protein | PSDVSF_28890 | Not Available | Negative | 3070901 - 3071242 | 12266.3 |
| hypothetical protein | PSDVSF_28900 | Not Available | Negative | 3071500 - 3071697 | 6501.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
