Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_28510 | O58968 | Positive | 3025950 - 3027068 | 41455.7 |
| sugar abc transporter permease | PSDVSF_28520 | O58967 | Positive | 3027071 - 3027898 | 30442.1 |
| hypothetical protein | PSDVSF_28530 | Not Available | Negative | 3027972 - 3028136 | 6334.43 |
| hypothetical protein | PSDVSF_28540 | Not Available | Negative | 3028240 - 3028968 | 28194.5 |
| pilus biosynthesis protein tade | PSDVSF_28550 | Not Available | Negative | 3029182 - 3029646 | 16769.1 |
| vwa domain-containing protein | PSDVSF_28560 | Not Available | Negative | 3029659 - 3030855 | 42810.6 |
| pilus biosynthesis protein tade | PSDVSF_28570 | Not Available | Negative | 3030893 - 3031285 | 13876.7 |
| sigma-54-dependent fis family transcriptional regulator | PSDVSF_28580 | Q06065 | Positive | 3031553 - 3032938 | 50285.6 |
| hypothetical protein | PSDVSF_28590 | Not Available | Positive | 3033392 - 3033571 | 6012.33 |
| type 4 prepilin peptidase 1 | PSDVSF_28600 | A2T195 | Positive | 3033719 - 3034267 | 19347.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
