Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PSDVSF_28310 | D4GPW1 | Negative | 3002507 - 3003490 | 34741.2 |
| abc transporter permease | PSDVSF_28320 | D4GPW2 | Negative | 3003491 - 3004534 | 37236.3 |
| abc transporter | PSDVSF_28330 | Q825P1 | Negative | 3004531 - 3006006 | 54070.3 |
| hypothetical protein | PSDVSF_28340 | Q2YKI6 | Negative | 3006010 - 3007245 | 44337.9 |
| transcription elongation factor grea | PSDVSF_28350 | B8DJL8 | Positive | 3007588 - 3008082 | 18126.5 |
| hypothetical protein | PSDVSF_28360 | Not Available | Positive | 3008144 - 3008926 | 28732.7 |
| rna pseudouridine synthase | PSDVSF_28370 | Q8ZIK1 | Positive | 3008923 - 3009558 | 23632.6 |
| glutamine synthetase | PSDVSF_28380 | Q54WR9 | Positive | 3009991 - 3012174 | 79874.1 |
| multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase | PSDVSF_28390 | O83142 | Positive | 3012351 - 3014075 | 62556.6 |
| hypothetical protein | PSDVSF_28400 | Q86CZ2 | Positive | 3014265 - 3016952 | 100854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
