Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | PSDVSF_28110 | Q54735 | Positive | 2979928 - 2980590 | 25152.2 |
| hypothetical protein | PSDVSF_28120 | Not Available | Negative | 2980620 - 2980802 | 6670.83 |
| hypothetical protein | PSDVSF_28130 | Not Available | Positive | 2980886 - 2981416 | 20648.1 |
| d-aminoacylase | PSDVSF_28140 | P94212 | Negative | 2981553 - 2983148 | 57696.7 |
| peptidase | PSDVSF_28150 | P65809 | Negative | 2983191 - 2984384 | 42256.3 |
| pyridoxal-5'-phosphate-dependent protein subunit beta | PSDVSF_28160 | Q5HIG2 | Negative | 2984393 - 2985868 | 54814.1 |
| threonine synthase | PSDVSF_28170 | Q58860 | Negative | 2985913 - 2987091 | 42028.5 |
| abc transporter substrate-binding protein | PSDVSF_28180 | A1WPV4 | Negative | 2987243 - 2988277 | 36842.9 |
| transporter | PSDVSF_28190 | Q9KR66 | Negative | 2988305 - 2989588 | 44966.4 |
| hypothetical protein | PSDVSF_28200 | P44994 | Negative | 2989585 - 2990130 | 20280.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
