Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa synthetase | PSDVSF_26940 | Q3UNX5 | Negative | 2849348 - 2850985 | 61378.8 |
| dna-binding protein | PSDVSF_26950 | Q56185 | Negative | 2851082 - 2851630 | 20467.5 |
| amp-binding protein | PSDVSF_26960 | O31826 | Negative | 2851888 - 2853528 | 61675.1 |
| dna-binding protein | PSDVSF_26970 | P0A9U6 | Negative | 2853538 - 2854098 | 20985.9 |
| hypothetical protein | PSDVSF_26980 | P10505 | Positive | 2854312 - 2855160 | 31817.9 |
| hypothetical protein | PSDVSF_26990 | Q8RCU0 | Positive | 2855164 - 2855817 | 23809.9 |
| iron export abc transporter permease subunit fetb | PSDVSF_27000 | O34684 | Positive | 2855814 - 2856596 | 28550.4 |
| hypothetical protein | PSDVSF_27010 | Not Available | Positive | 2856725 - 2857219 | 18224.5 |
| kinase inhibitor | PSDVSF_27020 | P12994 | Negative | 2857286 - 2857849 | 19704.4 |
| hypothetical protein | PSDVSF_27030 | P77634 | Negative | 2857905 - 2858789 | 32486.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
