Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | PSDVSF_26240 | P46149 | Negative | 2755665 - 2756369 | 26416.1 |
| asparaginase | PSDVSF_26250 | Q6GM78 | Negative | 2756428 - 2757336 | 32031.9 |
| hypothetical protein | PSDVSF_26260 | Q2W4T8 | Positive | 2757512 - 2759260 | 62511.0 |
| iron-sulfur-binding protein | PSDVSF_26270 | Q81I72 | Positive | 2759395 - 2760120 | 25801.0 |
| cobyrinic acid a,c-diamide synthase | PSDVSF_26280 | Q55458 | Negative | 2760248 - 2761312 | 38647.6 |
| acyl-coa synthetase | PSDVSF_26290 | O29057 | Negative | 2761387 - 2763489 | 74812.3 |
| ribonuclease 3 | PSDVSF_26300 | Q310Z1 | Positive | 2763506 - 2764189 | 25335.9 |
| flagellin | PSDVSF_26310 | Q05203 | Negative | 2764407 - 2765336 | 33295.2 |
| arac family transcriptional regulator | PSDVSF_26320 | O31449 | Negative | 2766150 - 2766944 | 29235.3 |
| hypothetical protein | PSDVSF_26330 | Not Available | Negative | 2766953 - 2767339 | 13637.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
