Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna small subunit methyltransferase g | PSDVSF_26150 | Q72CN3 | Positive | 2745083 - 2745760 | 25062.4 |
| cysteine--trna ligase | PSDVSF_26160 | C6BS23 | Negative | 2746007 - 2747464 | 55093.1 |
| hypothetical protein | PSDVSF_26170 | Not Available | Negative | 2747508 - 2748389 | 32769.4 |
| bifunctional enzyme ispd/ispf | PSDVSF_26180 | Q310X3 | Negative | 2748393 - 2749589 | 43061.6 |
| hypothetical protein | PSDVSF_26190 | Not Available | Negative | 2750028 - 2750825 | 30539.0 |
| hypothetical protein | PSDVSF_26200 | Q6G907 | Negative | 2750876 - 2751934 | 38952.3 |
| Trna-met | Not Available | Not Available | Positive | 2752052 - 2752127 | Not Available |
| mate family efflux transporter | PSDVSF_26210 | Q8EIX5 | Negative | 2752257 - 2753621 | 49335.6 |
| arac family transcriptional regulator | PSDVSF_26220 | O31449 | Positive | 2753808 - 2754638 | 30319.8 |
| membrane protein | PSDVSF_26230 | O31448 | Positive | 2754714 - 2755625 | 32056.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
