Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase era | PSDVSF_25650 | Q72G11 | Negative | 2691060 - 2691968 | 33770.3 |
| hypothetical protein | PSDVSF_25660 | O34887 | Negative | 2691970 - 2692380 | 15999.3 |
| diaminopimelate epimerase | PSDVSF_25670 | O67693 | Negative | 2693326 - 2694177 | 30707.2 |
| hypothetical protein | PSDVSF_25680 | Not Available | Positive | 2694352 - 2694606 | 9836.65 |
| mbl fold metallo-hydrolase | PSDVSF_25690 | Q8TLK5 | Positive | 2694685 - 2695437 | 27062.3 |
| histidine kinase | PSDVSF_25700 | O94474 | Positive | 2695547 - 2696878 | 49851.1 |
| hypothetical protein | PSDVSF_25710 | Q5XEP2 | Positive | 2697034 - 2698515 | 55442.1 |
| putative transporter yetk | PSDVSF_25720 | O31540 | Negative | 2698625 - 2699503 | 31039.3 |
| arac family transcriptional regulator | PSDVSF_25730 | O31449 | Negative | 2699528 - 2700367 | 31605.1 |
| hypothetical protein | PSDVSF_25740 | Not Available | Positive | 2700464 - 2701489 | 39382.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
