Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_25350 | Not Available | Negative | 2660484 - 2660969 | 18141.7 |
| cell shape-determining protein mrec | PSDVSF_25360 | P16926 | Negative | 2660953 - 2661837 | 31695.5 |
| rod shape-determining protein | PSDVSF_25370 | P0A9X5 | Negative | 2661932 - 2662975 | 37079.3 |
| tigr01212 family radical sam protein | PSDVSF_25380 | O35008 | Positive | 2663153 - 2664145 | 36584.5 |
| hypothetical protein | PSDVSF_25390 | Not Available | Positive | 2664356 - 2664628 | 9816.54 |
| amino acid abc transporter substrate-binding protein | PSDVSF_25400 | Not Available | Negative | 2664702 - 2665487 | 30082.3 |
| hypothetical protein | PSDVSF_25410 | O32620 | Negative | 2665746 - 2665943 | 6969.51 |
| hypothetical protein | PSDVSF_25420 | Not Available | Negative | 2665995 - 2666426 | 14949.2 |
| copper-translocating p-type atpase | PSDVSF_25430 | O32220 | Negative | 2666515 - 2668995 | 87045.9 |
| hypothetical protein | PSDVSF_25440 | Q06067 | Positive | 2669127 - 2671028 | 70063.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
