Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase epsilon chain | PSDVSF_25250 | C6BSP5 | Negative | 2651139 - 2651558 | 14914.8 |
| atp synthase subunit beta | PSDVSF_25260 | B8DRD2 | Negative | 2651571 - 2652968 | 50002.0 |
| atp synthase gamma chain | PSDVSF_25270 | C6BSP7 | Negative | 2652984 - 2653862 | 31894.6 |
| atp synthase subunit alpha | PSDVSF_25280 | Q313V8 | Negative | 2653877 - 2655385 | 54081.1 |
| atp synthase subunit delta | PSDVSF_25290 | C6BSP9 | Negative | 2655390 - 2655941 | 19638.9 |
| atp synthase subunit b | PSDVSF_25300 | A1VFJ1 | Negative | 2655938 - 2656519 | 20996.2 |
| hypothetical protein | PSDVSF_25310 | B1W0A7 | Negative | 2656538 - 2656960 | 15032.2 |
| membrane protein | PSDVSF_25320 | Not Available | Negative | 2657094 - 2657459 | 12752.2 |
| rod shape-determining protein roda | PSDVSF_25330 | P0ABG8 | Negative | 2657515 - 2658627 | 41726.7 |
| penicillin-binding protein | PSDVSF_25340 | P44469 | Negative | 2658617 - 2660500 | 70650.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
