Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| asparagine--trna ligase | PSDVSF_01830 | Q317J6 | Positive | 190397 - 191764 | 51885.2 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 192409 - 193958 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 194020 - 194096 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 194109 - 194184 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 194277 - 197212 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 197288 - 197396 | Not Available |
| tetr family transcriptional regulator | PSDVSF_01840 | B4EX96 | Positive | 198022 - 198660 | 24269.9 |
| transcriptional regulator | PSDVSF_01850 | P55324 | Negative | 198700 - 199092 | 14660.1 |
| hypothetical protein | PSDVSF_01860 | Not Available | Positive | 199421 - 199864 | 16541.2 |
| hypothetical protein | PSDVSF_01870 | Not Available | Positive | 200037 - 200924 | 33558.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
