Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_24950 | A6X5X4 | Positive | 2621303 - 2622955 | 61362.4 |
| 2-polyprenylphenol hydroxylase | PSDVSF_24960 | Q8U195 | Negative | 2622997 - 2625258 | 81363.4 |
| pyrimidine dimer dna glycosylase /dna-(apurinic or apyrimidinic site) lyase | PSDVSF_24970 | Not Available | Negative | 2625664 - 2626089 | 16249.4 |
| hypothetical protein | PSDVSF_24980 | Not Available | Negative | 2626096 - 2626644 | 21331.8 |
| 30s ribosomal protein s1 | PSDVSF_24990 | P37985 | Positive | 2627025 - 2628818 | 66274.9 |
| signal peptide peptidase sppa | PSDVSF_25000 | O34525 | Positive | 2628830 - 2629735 | 32573.8 |
| hypothetical protein | PSDVSF_25010 | Q06067 | Negative | 2629990 - 2632167 | 79108.3 |
| hypothetical protein | PSDVSF_25020 | Not Available | Positive | 2632108 - 2632344 | 8573.29 |
| hypothetical protein | PSDVSF_25030 | Not Available | Negative | 2632396 - 2633283 | 32438.5 |
| hypothetical protein | PSDVSF_25040 | O67821 | Negative | 2633367 - 2634137 | 28497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
