Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PSDVSF_23860 | O05255 | Positive | 2497545 - 2498519 | 34144.0 |
| cytidine deaminase | PSDVSF_23870 | P32320 | Positive | 2498520 - 2498924 | 14399.4 |
| deoxyribose-phosphate aldolase | PSDVSF_23880 | A1S474 | Positive | 2498927 - 2499745 | 28866.7 |
| thymidine phosphorylase | PSDVSF_23890 | Q6LUH3 | Positive | 2499755 - 2501089 | 46584.3 |
| phosphopentomutase | PSDVSF_23900 | A6UET6 | Positive | 2501090 - 2502310 | 42982.2 |
| chloramphenicol acetyltransferase | PSDVSF_23910 | P22616 | Negative | 2502312 - 2502941 | 23707.1 |
| hypothetical protein | PSDVSF_23920 | Not Available | Positive | 2503454 - 2505178 | 60275.3 |
| paraslipin | PSDVSF_23930 | O60121 | Negative | 2505299 - 2506324 | 37365.4 |
| hypothetical protein | PSDVSF_23940 | Not Available | Negative | 2506326 - 2506790 | 16905.6 |
| hypothetical protein | PSDVSF_23950 | Not Available | Positive | 2506973 - 2507425 | 16889.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
