Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | PSDVSF_23170 | Q6FAW0 | Positive | 2420408 - 2420848 | 16897.1 |
| lysine transporter lyse | PSDVSF_23180 | P0AG36 | Positive | 2420861 - 2421499 | 22432.4 |
| hypothetical protein | PSDVSF_23190 | P9WLM4 | Negative | 2421523 - 2421873 | 12853.6 |
| hypothetical protein | PSDVSF_23200 | Not Available | Positive | 2422120 - 2422272 | 5234.12 |
| transcriptional regulator | PSDVSF_23210 | Not Available | Negative | 2422257 - 2422427 | 6275.63 |
| hypothetical protein | PSDVSF_23220 | P40399 | Positive | 2422590 - 2424209 | 60685.9 |
| peptidoglycan lytic exotransglycosylase | PSDVSF_23230 | A8ZWR8 | Positive | 2424212 - 2425627 | 53285.5 |
| 4fe-4s ferredoxin | PSDVSF_23240 | Not Available | Negative | 2425707 - 2426819 | 40047.2 |
| hypothetical protein | PSDVSF_23250 | Q9HWS0 | Negative | 2427007 - 2428047 | 38577.6 |
| haloacid dehalogenase | PSDVSF_23260 | Q57IZ2 | Negative | 2428116 - 2428784 | 24050.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
