Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | PSDVSF_22190 | Q57552 | Negative | 2316344 - 2317414 | 37057.1 |
| iron abc transporter substrate-binding protein | PSDVSF_22200 | Q57550 | Negative | 2317416 - 2318525 | 41087.4 |
| iron abc transporter substrate-binding protein | PSDVSF_22210 | P44206 | Positive | 2318979 - 2319980 | 37570.5 |
| iron abc transporter permease | PSDVSF_22220 | Q57130 | Positive | 2319977 - 2321044 | 37442.1 |
| iron abc transporter atp-binding protein | PSDVSF_22230 | Q57243 | Positive | 2321044 - 2321889 | 31050.1 |
| hypothetical protein | PSDVSF_22240 | P46326 | Positive | 2321942 - 2322574 | 23749.7 |
| radical sam protein | PSDVSF_22250 | Q58218 | Positive | 2322574 - 2324409 | 68064.0 |
| 4fe-4s ferredoxin | PSDVSF_22260 | P00202 | Negative | 2324539 - 2325822 | 47780.6 |
| transcriptional regulator | PSDVSF_22270 | Q9HTH5 | Positive | 2326295 - 2327353 | 39203.0 |
| arac family transcriptional regulator | PSDVSF_22280 | Q8G9F9 | Positive | 2327316 - 2327918 | 21817.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
