Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase 2 | PSDVSF_01540 | C6BV99 | Negative | 154824 - 156035 | 43692.4 |
| alanine racemase | PSDVSF_01550 | Q9X1T3 | Negative | 156535 - 157593 | 38591.2 |
| hypothetical protein | PSDVSF_01560 | Not Available | Negative | 157593 - 158672 | 39409.0 |
| hypothetical protein | PSDVSF_01570 | Q9SVM8 | Positive | 159186 - 159377 | 7302.38 |
| Trna-pro | Not Available | Not Available | Positive | 159606 - 159682 | Not Available |
| chemotaxis response regulator protein-glutamate methylesterase of group 2 operon | PSDVSF_01580 | P62637 | Positive | 159923 - 160972 | 37432.1 |
| hypothetical protein | PSDVSF_01590 | Not Available | Positive | 161019 - 162956 | 70467.0 |
| chemotaxis protein methyltransferase | PSDVSF_01600 | Q9KS61 | Positive | 162966 - 163841 | 34056.9 |
| response regulator | PSDVSF_01610 | P71403 | Positive | 163901 - 164269 | 13603.8 |
| chemotaxis protein chea | PSDVSF_01620 | P29072 | Positive | 164361 - 167333 | 107011.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
