Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_22090 | P0CF65 | Negative | 2307870 - 2308313 | 16467.6 |
| hypothetical protein | PSDVSF_22100 | Not Available | Positive | 2308401 - 2308691 | 10964.1 |
| amino acid transporter | PSDVSF_22110 | P70775 | Negative | 2308777 - 2309385 | 21206.2 |
| lysr family transcriptional regulator | PSDVSF_22120 | Q02H78 | Positive | 2309538 - 2310431 | 33130.8 |
| duf2959 domain-containing protein | PSDVSF_22130 | Not Available | Positive | 2310499 - 2311140 | 24157.4 |
| gntr family transcriptional regulator | PSDVSF_22140 | P96663 | Negative | 2311222 - 2312589 | 49471.6 |
| hypothetical protein | PSDVSF_22150 | P0AG36 | Positive | 2312674 - 2313276 | 21366.1 |
| fumarate hydratase class ii 2 | PSDVSF_22160 | Q89XM2 | Negative | 2313273 - 2314667 | 50364.1 |
| hypothetical protein | PSDVSF_22170 | O29816 | Negative | 2314957 - 2315568 | 22139.6 |
| abc transporter atp-binding protein | PSDVSF_22180 | Q57554 | Negative | 2315592 - 2316347 | 27571.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
