Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein tolq | PSDVSF_21490 | P50598 | Positive | 2243412 - 2244113 | 25749.7 |
| protein tolr | PSDVSF_21500 | P50599 | Positive | 2244123 - 2244539 | 15385.0 |
| hypothetical protein | PSDVSF_21510 | Not Available | Positive | 2244546 - 2245994 | 53403.2 |
| hypothetical protein | PSDVSF_21520 | A7X624 | Positive | 2246108 - 2248939 | 107445.0 |
| dna-binding response regulator | PSDVSF_21530 | P54662 | Positive | 2248932 - 2249606 | 25169.7 |
| molecular chaperone hsp20 | PSDVSF_21540 | Q72QA1 | Negative | 2249699 - 2250064 | 13872.5 |
| molecular chaperone hsp20 | PSDVSF_21550 | Q4UKR8 | Negative | 2250078 - 2250491 | 15663.7 |
| upf0434 protein | PSDVSF_21560 | Q3SIR6 | Negative | 2250628 - 2250816 | 6694.25 |
| phosphatase | PSDVSF_21570 | P44176 | Positive | 2250957 - 2251817 | 30776.8 |
| peptidase u32 | PSDVSF_21580 | P44700 | Positive | 2251907 - 2253283 | 50836.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
