Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | PSDVSF_01440 | O34563 | Negative | 144251 - 145075 | 30248.6 |
| polar amino acid abc transporter atp-binding protein | PSDVSF_01450 | P27675 | Negative | 145154 - 145882 | 26894.8 |
| l-serine dehydratase | PSDVSF_01460 | P71349 | Negative | 146041 - 147402 | 48959.9 |
| glycosyl transferase family 2 | PSDVSF_01470 | Not Available | Positive | 147697 - 149358 | 60355.5 |
| succinylglutamate desuccinylase | PSDVSF_01480 | E1V7W0 | Negative | 149295 - 150323 | 37233.1 |
| putative alpha-l-glutamate ligase | PSDVSF_01490 | C6BYK5 | Negative | 150362 - 151267 | 32207.4 |
| ribosomal protein s6 modification protein | PSDVSF_01500 | A8H4D4 | Negative | 151264 - 151752 | 18140.3 |
| hypothetical protein | PSDVSF_01510 | Not Available | Positive | 152028 - 152387 | 12828.5 |
| magnesium and cobalt transport protein cora | PSDVSF_01520 | Q9WZ31 | Negative | 152508 - 153560 | 39986.9 |
| mechanosensitive ion channel protein mscs | PSDVSF_01530 | Q58111 | Positive | 153662 - 154489 | 30920.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
