Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | PSDVSF_20590 | P59599 | Negative | 2152316 - 2152774 | 17363.2 |
| hypothetical protein | PSDVSF_20600 | O31687 | Negative | 2152778 - 2153308 | 19220.2 |
| vitamin b12-dependent methionine synthase | PSDVSF_20610 | O33259 | Negative | 2153663 - 2156071 | 85904.6 |
| rna polymerase sigma factor | PSDVSF_20620 | Q01624 | Positive | 2156379 - 2157386 | 38582.4 |
| hypothetical protein | PSDVSF_20630 | P42810 | Positive | 2157416 - 2159191 | 66402.2 |
| hypothetical protein | PSDVSF_20640 | Not Available | Positive | 2159191 - 2160066 | 31826.4 |
| hypothetical protein | PSDVSF_20650 | Not Available | Positive | 2160066 - 2160371 | 11797.5 |
| ribose 5-phosphate isomerase b | PSDVSF_20660 | P39156 | Positive | 2160395 - 2160835 | 16060.4 |
| transketolase | PSDVSF_20670 | A0A0I9QGZ2 | Positive | 2160862 - 2162823 | 71473.1 |
| fructose-1,6-bisphosphatase | PSDVSF_20680 | Q6M6E7 | Positive | 2162833 - 2163816 | 35129.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
