Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | PSDVSF_20190 | C4XTP0 | Negative | 2109101 - 2109979 | 32814.7 |
| phosphoribosyl-amp cyclohydrolase | PSDVSF_20200 | Q30VD6 | Negative | 2109979 - 2110353 | 14212.8 |
| hypothetical protein | PSDVSF_20210 | Not Available | Negative | 2110499 - 2111131 | 23406.7 |
| spore coat polysaccharide biosynthesis protein spsc | PSDVSF_20220 | P39623 | Positive | 2111349 - 2112512 | 42608.8 |
| hypothetical protein | PSDVSF_20230 | Not Available | Positive | 2112505 - 2113515 | 37274.4 |
| hypothetical protein | PSDVSF_20240 | Q73RG3 | Negative | 2113523 - 2114752 | 45887.2 |
| hypothetical protein | PSDVSF_20250 | Not Available | Negative | 2115458 - 2115739 | 10019.4 |
| hypothetical protein | PSDVSF_20260 | Q3YL97 | Positive | 2115833 - 2117296 | 53914.1 |
| hypothetical protein | PSDVSF_20270 | D5CBA0 | Positive | 2117306 - 2124325 | 242670.0 |
| hypothetical protein | PSDVSF_20280 | Not Available | Positive | 2124329 - 2124652 | 12606.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
