Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyl transferase subunit alpha/beta | PSDVSF_01340 | A4IRQ7 | Positive | 129422 - 131692 | 85124.1 |
| hypothetical protein | PSDVSF_01350 | Not Available | Positive | 131766 - 132416 | 24453.7 |
| hypothetical protein | PSDVSF_01360 | Not Available | Positive | 132431 - 132775 | 12757.2 |
| single-stranded dna-binding protein | PSDVSF_01370 | P77953 | Positive | 132821 - 133375 | 20505.7 |
| hypothetical protein | PSDVSF_01380 | Not Available | Negative | 133429 - 134301 | 32502.7 |
| snf2 family protein | PSDVSF_01390 | P94593 | Negative | 134419 - 137628 | 123266.0 |
| peptide-binding protein | PSDVSF_01400 | P42061 | Positive | 137818 - 139455 | 61701.8 |
| gtp pyrophosphokinase | PSDVSF_01410 | O52177 | Positive | 139469 - 141643 | 82114.2 |
| hypothetical protein | PSDVSF_01420 | P00135 | Negative | 141759 - 142154 | 14212.2 |
| amino acid abc transporter permease | PSDVSF_01430 | P0AER4 | Negative | 142418 - 144181 | 67127.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
