Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PSDVSF_19290 | Not Available | Negative | 2019590 - 2020354 | 27907.2 |
| hypothetical protein | PSDVSF_19300 | P50830 | Negative | 2020443 - 2023289 | 105128.0 |
| hypothetical protein | PSDVSF_19310 | Q9WY30 | Positive | 2023455 - 2024063 | 22338.9 |
| metallophosphoesterase | PSDVSF_19320 | O34870 | Negative | 2024070 - 2024861 | 28715.6 |
| atp-grasp domain-containing protein | PSDVSF_19330 | Not Available | Negative | 2024896 - 2026062 | 43622.4 |
| acetoacetate metabolism regulatory protein atoc | PSDVSF_19340 | Q06065 | Negative | 2026068 - 2027441 | 51078.4 |
| hypothetical protein | PSDVSF_19350 | Q8K9E3 | Positive | 2027568 - 2028149 | 21953.5 |
| multicopper polyphenol oxidase | PSDVSF_19360 | A0A384KG77 | Positive | 2028137 - 2028901 | 27687.5 |
| hypothetical protein | PSDVSF_19370 | Not Available | Positive | 2028906 - 2029082 | 6627.74 |
| b12-binding domain-containing radical sam protein | PSDVSF_19380 | O58549 | Positive | 2029087 - 2030463 | 51486.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
