Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integration host factor subunit alpha | PSDVSF_19190 | A1K4E7 | Negative | 2011747 - 2012034 | 10897.3 |
| hydrolase | PSDVSF_19200 | O07513 | Negative | 2012066 - 2012491 | 15364.5 |
| transferase | PSDVSF_19210 | Q0P9D1 | Negative | 2012808 - 2013443 | 20769.1 |
| malonyl coa-acyl carrier protein transacylase | PSDVSF_19220 | Q99UN8 | Positive | 2013603 - 2014529 | 32574.1 |
| shikimate dehydrogenase (nadp(+)) | PSDVSF_19230 | C6BUS3 | Positive | 2014533 - 2015339 | 28873.4 |
| hypothetical protein | PSDVSF_19240 | Not Available | Negative | 2015328 - 2015486 | 5784.44 |
| peptidyl-prolyl cis-trans isomerase b | PSDVSF_19250 | P44499 | Positive | 2015473 - 2016012 | 19905.9 |
| chemoreceptor glutamine deamidase ched | PSDVSF_19260 | Q01VJ5 | Negative | 2016082 - 2016567 | 17256.1 |
| dna methylase | PSDVSF_19270 | Q58322 | Positive | 2016703 - 2017461 | 27058.8 |
| n-acetylmuramoyl-l-alanine amidase | PSDVSF_19280 | Q9K0V3 | Positive | 2017607 - 2019421 | 67255.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
