Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | PSDVSF_18290 | Q37906 | Negative | 1910527 - 1911249 | 27155.5 |
| protein hflc | PSDVSF_18300 | P44545 | Negative | 1911531 - 1912382 | 31941.7 |
| hflk protein | PSDVSF_18310 | Q9KV09 | Negative | 1912396 - 1913463 | 40524.8 |
| hypothetical protein | PSDVSF_18320 | Not Available | Positive | 1913572 - 1914054 | 18934.9 |
| rnd transporter | PSDVSF_18330 | P58411 | Positive | 1914051 - 1915142 | 39823.5 |
| macrolide abc transporter atp-binding protein | PSDVSF_18340 | O31711 | Positive | 1915145 - 1915852 | 25723.8 |
| abc transporter permease | PSDVSF_18350 | Q3ATR5 | Positive | 1916026 - 1917255 | 44278.5 |
| hypothetical protein | PSDVSF_18360 | Not Available | Positive | 1917301 - 1917816 | 19481.5 |
| ribonuclease h | PSDVSF_18370 | Q15TA7 | Positive | 1917809 - 1918294 | 18061.6 |
| competence damage-inducible protein a | PSDVSF_18380 | B2UNF6 | Negative | 1919169 - 1919654 | 16755.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
