Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylglycinamide formyltransferase | PSDVSF_18190 | P08179 | Negative | 1897597 - 1898301 | 25008.1 |
| amino acid abc transporter substrate-binding protein | PSDVSF_18200 | Not Available | Positive | 1898633 - 1899379 | 28379.4 |
| uroporphyrinogen iii methyltransferase | PSDVSF_18210 | Q59294 | Negative | 1899451 - 1900959 | 54559.3 |
| valine--trna ligase | PSDVSF_18220 | Q72E47 | Negative | 1901143 - 1903809 | 100712.0 |
| hypothetical protein | PSDVSF_18230 | Not Available | Positive | 1904062 - 1905306 | 45443.3 |
| hypothetical protein | PSDVSF_18240 | Not Available | Positive | 1905459 - 1907360 | 68504.2 |
| trna pseudouridine synthase a | PSDVSF_18250 | C6BW69 | Negative | 1907369 - 1908115 | 27950.7 |
| hypothetical protein | PSDVSF_18260 | Not Available | Negative | 1908130 - 1908441 | 11078.6 |
| membrane protein | PSDVSF_18270 | Q58281 | Negative | 1908453 - 1909487 | 38376.6 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | PSDVSF_18280 | Q311U7 | Negative | 1909488 - 1910372 | 31413.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
