Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| menaquinone reductase, multiheme cytochrome c subunit | PSDVSF_01140 | P0DOV3 | Positive | 110779 - 111528 | 27980.9 |
| menaquinone reductase, molybdopterin-binding-like subunit | PSDVSF_01150 | Q72E84 | Positive | 111543 - 113486 | 66232.5 |
| menaquinone reductase, iron-sulfur cluster-binding subunit | PSDVSF_01160 | Q72E85 | Positive | 113498 - 114331 | 30843.5 |
| menaquinone reductase, integral membrane subunit | PSDVSF_01170 | Q72E86 | Positive | 114343 - 115572 | 45899.2 |
| c4-dicarboxylate abc transporter substrate-binding protein | PSDVSF_01180 | P0A3T3 | Positive | 115914 - 116936 | 36008.6 |
| polar amino acid abc transporter atp-binding protein | PSDVSF_01190 | P45769 | Positive | 117302 - 118030 | 27256.2 |
| amino acid abc transporter substrate-binding protein | PSDVSF_01200 | O34563 | Positive | 118070 - 118876 | 29555.8 |
| abc transporter permease | PSDVSF_01210 | O34671 | Positive | 118956 - 119723 | 29406.4 |
| amino acid abc transporter permease | PSDVSF_01220 | P0AEQ8 | Positive | 119734 - 120447 | 26997.5 |
| precorrin-8x methylmutase | PSDVSF_01230 | Q8EXP7 | Positive | 120592 - 121230 | 23026.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
