Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dksa/trar c4-type zinc finger family protein | PSDVSF_17890 | P0ABS3 | Negative | 1871766 - 1872101 | 12454.2 |
| aminotransferase | PSDVSF_17900 | Q9V0L2 | Negative | 1872098 - 1873255 | 42287.1 |
| dehydrogenase | PSDVSF_17910 | Q9SY73 | Positive | 1873308 - 1874057 | 26526.9 |
| hypothetical protein | PSDVSF_17920 | Not Available | Positive | 1874135 - 1874683 | 20407.7 |
| aminoglycoside phosphotransferase | PSDVSF_17930 | B2IHG2 | Positive | 1874690 - 1875631 | 34626.0 |
| upf0061 protein | PSDVSF_17940 | C6C1K6 | Positive | 1875631 - 1877085 | 53431.2 |
| hypothetical protein | PSDVSF_17950 | Not Available | Negative | 1877208 - 1878686 | 52973.0 |
| hypothetical protein | PSDVSF_17960 | P00135 | Negative | 1878761 - 1879171 | 14172.6 |
| precorrin-3b c(17)-methyltransferase | PSDVSF_17970 | Q05590 | Negative | 1879342 - 1880088 | 26526.3 |
| cobalamin biosynthesis protein cbig | PSDVSF_17980 | O87697 | Negative | 1880081 - 1881109 | 36027.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
