Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | PSDVSF_17590 | P52659 | Positive | 1842955 - 1843860 | 34684.9 |
| protein translocase subunit seca | PSDVSF_17600 | C6BVR6 | Negative | 1843947 - 1846493 | 96090.2 |
| hypothetical protein | PSDVSF_17610 | Not Available | Negative | 1846700 - 1848475 | 64320.3 |
| glycolate oxidase | PSDVSF_17620 | Q6LYC4 | Negative | 1848488 - 1849612 | 40248.1 |
| glycolate oxidase | PSDVSF_17630 | P94535 | Negative | 1849616 - 1850872 | 44201.7 |
| hypothetical protein | PSDVSF_17640 | Not Available | Negative | 1851156 - 1851470 | 11793.9 |
| hypothetical protein | PSDVSF_17650 | P39325 | Positive | 1851354 - 1852301 | 35361.6 |
| upf0102 protein | PSDVSF_17660 | A1VFE8 | Positive | 1852348 - 1852749 | 15089.1 |
| ribosomal rna small subunit methyltransferase i | PSDVSF_17670 | Q08329 | Positive | 1852746 - 1853573 | 29934.8 |
| biotin synthase | PSDVSF_17680 | Q3A4K3 | Positive | 1853779 - 1854753 | 35095.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
