Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0178 protein | PSDVSF_17390 | C6BYX0 | Positive | 1823769 - 1824233 | 16879.5 |
| hypothetical protein | PSDVSF_17400 | Not Available | Positive | 1824712 - 1825890 | 45470.2 |
| mbl fold metallo-hydrolase | PSDVSF_17410 | Q9F0J6 | Negative | 1826013 - 1827215 | 45435.7 |
| hypothetical protein | PSDVSF_17420 | Q93PP8 | Negative | 1827311 - 1827760 | 16325.0 |
| desulfoferrodoxin | PSDVSF_17430 | Q3A221 | Negative | 1827980 - 1828366 | 13803.8 |
| rubrerythrin | PSDVSF_17440 | P24931 | Negative | 1828390 - 1828962 | 21255.8 |
| transcriptional repressor | PSDVSF_17450 | P71086 | Negative | 1829257 - 1829655 | 14832.1 |
| chemoreceptor protein a | PSDVSF_17460 | P35841 | Negative | 1829883 - 1831907 | 72312.2 |
| hypothetical protein | PSDVSF_17470 | Q57142 | Negative | 1831915 - 1832349 | 15465.0 |
| phosphoribosylformylglycinamidine synthase ii | PSDVSF_17480 | Q97BD5 | Negative | 1832555 - 1835551 | 108307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
