Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase nickel incorporation protein hypb | PSDVSF_17190 | P0AAN4 | Negative | 1801214 - 1801873 | 24492.5 |
| putative hydrogenase nickel incorporation protein hypa | PSDVSF_17200 | Q729M2 | Negative | 1801915 - 1802274 | 12902.8 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | PSDVSF_17210 | C6BVV4 | Positive | 1802708 - 1803436 | 25840.2 |
| dihydroxy-acid dehydratase | PSDVSF_17220 | C6BUM7 | Positive | 1803775 - 1805436 | 58428.4 |
| abc transporter substrate-binding protein | PSDVSF_17230 | P0AEN0 | Negative | 1805628 - 1806389 | 28720.4 |
| aminotransferase | PSDVSF_17240 | O07587 | Negative | 1806795 - 1807985 | 43002.7 |
| signal peptide peptidase sppa | PSDVSF_17250 | O34525 | Negative | 1808402 - 1809379 | 35218.6 |
| hd family phosphohydrolase | PSDVSF_17260 | Q4UU85 | Negative | 1809457 - 1810140 | 24826.9 |
| hypothetical protein | PSDVSF_17270 | Not Available | Negative | 1810155 - 1810478 | 11660.0 |
| hypothetical protein | PSDVSF_17280 | O58371 | Negative | 1810801 - 1811475 | 25520.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
