Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | PSDVSF_01040 | Not Available | Positive | 102910 - 103506 | 20726.1 |
| cobalt abc transporter permease | PSDVSF_01050 | Q03PY7 | Positive | 103652 - 104305 | 23573.0 |
| abc transporter atp-binding protein | PSDVSF_01060 | Q9V1Q4 | Positive | 104309 - 105154 | 30765.0 |
| abc transporter atp-binding protein | PSDVSF_01070 | A3CVD3 | Positive | 105165 - 105965 | 29037.3 |
| hypothetical protein | PSDVSF_01080 | Not Available | Negative | 106236 - 106526 | 9744.24 |
| hypothetical protein | PSDVSF_01090 | Not Available | Positive | 106666 - 106854 | 6956.96 |
| nucleoside triphosphate pyrophosphohydrolase | PSDVSF_01100 | Q9X015 | Negative | 107040 - 107846 | 30607.0 |
| colicin v biosynthesis protein | PSDVSF_01110 | P45108 | Negative | 107885 - 108412 | 19397.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | PSDVSF_01120 | P37780 | Positive | 108602 - 109171 | 21389.5 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | PSDVSF_01130 | P07874 | Positive | 109177 - 110607 | 52762.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
