Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | PSDVSF_15900 | P0A0U8 | Positive | 1669339 - 1671303 | 71972.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | PSDVSF_15910 | Q1MPC4 | Positive | 1671275 - 1672801 | 55862.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | PSDVSF_15920 | P96613 | Positive | 1672798 - 1674189 | 50140.8 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | PSDVSF_15930 | C6BYG9 | Positive | 1674186 - 1675262 | 39074.1 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | PSDVSF_15940 | Q313Q5 | Positive | 1675266 - 1676570 | 47781.0 |
| cell division protein ftsw | PSDVSF_15950 | B3E3Y3 | Positive | 1676563 - 1677684 | 40653.7 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | PSDVSF_15960 | C6BYG6 | Positive | 1677681 - 1678775 | 38395.7 |
| udp-n-acetylmuramate--l-alanine ligase | PSDVSF_15970 | C6BYG5 | Positive | 1678778 - 1680247 | 53419.0 |
| udp-n-acetylenolpyruvoylglucosamine reductase | PSDVSF_15980 | Q728V0 | Positive | 1680257 - 1681138 | 31505.0 |
| cell division protein ftsq | PSDVSF_15990 | Q748D9 | Positive | 1681135 - 1682028 | 33261.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
