Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | PSDVSF_14910 | P33394 | Positive | 1565202 - 1565555 | 12932.6 |
| response regulator | PSDVSF_14920 | P33394 | Positive | 1565700 - 1566056 | 13412.0 |
| histidine kinase | PSDVSF_14930 | Q06067 | Positive | 1566154 - 1568055 | 69727.9 |
| protein rrf2 | PSDVSF_14940 | P33395 | Positive | 1568160 - 1568600 | 16223.6 |
| pas domain-containing sensor histidine kinase | PSDVSF_14950 | Q9HWA7 | Positive | 1568637 - 1570907 | 86184.3 |
| hypothetical protein | PSDVSF_14960 | P44799 | Positive | 1571119 - 1571691 | 21893.6 |
| hypothetical protein | PSDVSF_14970 | P0DV45 | Positive | 1571703 - 1573088 | 52823.3 |
| sensor histidine kinase | PSDVSF_14980 | P10955 | Positive | 1573337 - 1574488 | 42691.3 |
| hypothetical protein | PSDVSF_14990 | Q8THF6 | Positive | 1574488 - 1576833 | 89211.9 |
| thioredoxin reductase | PSDVSF_15000 | Q928B5 | Positive | 1576920 - 1578605 | 60605.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
