Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ala | Not Available | Not Available | Positive | 1507442 - 1507517 | Not Available |
| peptide abc transporter permease | PSDVSF_14260 | P42062 | Positive | 1507660 - 1508658 | 36670.0 |
| peptide abc transporter permease | PSDVSF_14270 | P42063 | Positive | 1508655 - 1509497 | 30213.0 |
| hypothetical protein | PSDVSF_14280 | P40677 | Positive | 1509494 - 1509961 | 17112.6 |
| alginate lyase | PSDVSF_14290 | Not Available | Positive | 1509966 - 1511180 | 46059.9 |
| dna repair protein recn | PSDVSF_14300 | P17894 | Positive | 1511191 - 1512804 | 60796.0 |
| upf0056 inner membrane protein | PSDVSF_14310 | Q9UZ49 | Positive | 1512874 - 1513467 | 20753.2 |
| acyl-acp thioesterase | PSDVSF_14320 | Q9SV64 | Positive | 1513577 - 1514335 | 29164.4 |
| n-acetyltransferase | PSDVSF_14330 | Q6Z1Y6 | Positive | 1514332 - 1514763 | 15982.1 |
| hypothetical protein | PSDVSF_14340 | P0AEN0 | Positive | 1514805 - 1515662 | 32343.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
