Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | PSDVSF_13760 | P72335 | Negative | 1451433 - 1452320 | 33523.8 |
| tonb-dependent receptor | PSDVSF_13770 | P31827 | Negative | 1452330 - 1454798 | 91604.4 |
| peptidase m16 | PSDVSF_13780 | P31828 | Negative | 1454913 - 1457699 | 103514.0 |
| abc transporter substrate-binding protein | PSDVSF_13790 | P33913 | Positive | 1458144 - 1459976 | 69524.5 |
| abc transporter permease | PSDVSF_13800 | P0AFU1 | Positive | 1459973 - 1461070 | 40501.2 |
| abc transporter permease | PSDVSF_13810 | P33915 | Positive | 1461063 - 1462091 | 38329.4 |
| hypothetical protein | PSDVSF_13820 | Not Available | Negative | 1462103 - 1462324 | 8176.49 |
| hypothetical protein | PSDVSF_13830 | P33916 | Positive | 1462568 - 1463704 | 42696.2 |
| hypothetical protein | PSDVSF_13840 | Not Available | Positive | 1463701 - 1464483 | 30473.7 |
| biopolymer transporter exbb | PSDVSF_13850 | O27101 | Positive | 1464483 - 1465940 | 53216.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
