Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylthioribose-1-phosphate isomerase | PSDVSF_00660 | C6C0F7 | Positive | 66498 - 67550 | 38445.9 |
| gtpase der | PSDVSF_00670 | C6C0G0 | Positive | 67668 - 69179 | 56776.9 |
| Trna-ser | Not Available | Not Available | Positive | 69266 - 69359 | Not Available |
| hypothetical protein | PSDVSF_00680 | Not Available | Positive | 69627 - 70703 | 41283.4 |
| hypothetical protein | PSDVSF_00690 | Not Available | Positive | 70684 - 71268 | 22060.7 |
| hypothetical protein | PSDVSF_00700 | Not Available | Positive | 71265 - 71972 | 26255.5 |
| hypothetical protein | PSDVSF_00710 | Not Available | Positive | 72265 - 73251 | 37148.2 |
| transcriptional repressor | PSDVSF_00720 | A8FKI7 | Negative | 73273 - 73701 | 16453.7 |
| Trna-ser | Not Available | Not Available | Positive | 73918 - 74009 | Not Available |
| integrase | PSDVSF_00730 | P08320 | Positive | 74193 - 75410 | 46232.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
