Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s) ferredoxin | PSDVSF_12560 | P07324 | Negative | 1321892 - 1322194 | 11054.2 |
| nitrogenase cofactor biosynthesis protein nifb | PSDVSF_12570 | Q8KC85 | Negative | 1322238 - 1323398 | 41296.9 |
| nitrogenase molybdenum-iron protein subunit beta | PSDVSF_12580 | P11347 | Negative | 1323472 - 1324845 | 50134.6 |
| nitrogenase protein alpha chain | PSDVSF_12590 | P00467 | Negative | 1324992 - 1326629 | 60808.6 |
| p-ii family nitrogen regulator | PSDVSF_12600 | P51604 | Negative | 1326654 - 1327028 | 12935.6 |
| nitrogen fixation nifhd region glnb 1 | PSDVSF_12610 | Q50786 | Negative | 1327028 - 1327381 | 12439.0 |
| nitrogenase iron protein | PSDVSF_12620 | C6BX34 | Negative | 1327537 - 1328367 | 29802.7 |
| homocitrate synthase | PSDVSF_12630 | Q8RCF9 | Positive | 1328701 - 1329795 | 39041.5 |
| hypothetical protein | PSDVSF_12640 | Not Available | Positive | 1329806 - 1330009 | 7095.63 |
| molybdate abc transporter permease | PSDVSF_12650 | Q08382 | Positive | 1330009 - 1330743 | 26126.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
