Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenylate/guanylate cyclase domain-containing protein | PSDVSF_12360 | P40137 | Positive | 1283881 - 1285986 | 76394.2 |
| type i secretion c-terminal target domain-containing protein | PSDVSF_12370 | Q1M755 | Positive | 1286569 - 1295526 | 313247.0 |
| hypothetical protein | PSDVSF_12380 | Not Available | Positive | 1295615 - 1296397 | 28226.6 |
| hypothetical protein | PSDVSF_12390 | Not Available | Positive | 1296982 - 1301214 | 149613.0 |
| channel protein tolc | PSDVSF_12400 | Q8G0Y6 | Positive | 1301628 - 1302914 | 47973.6 |
| hd family phosphohydrolase | PSDVSF_12410 | Q9KL18 | Negative | 1303469 - 1305571 | 76849.1 |
| hypothetical protein | PSDVSF_12420 | Not Available | Negative | 1305624 - 1306322 | 26698.8 |
| hlyd family type i secretion membrane fusion protein | PSDVSF_12430 | P09986 | Negative | 1306328 - 1307656 | 50140.8 |
| abc transporter | PSDVSF_12440 | P0DKX5 | Negative | 1307664 - 1310033 | 86421.9 |
| quinone oxidoreductase | PSDVSF_12450 | Q84V25 | Negative | 1310362 - 1311357 | 34456.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
