Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgk | PSDVSF_00560 | P39810 | Positive | 55623 - 57761 | 77568.4 |
| flagellar hook-associated protein 3 | PSDVSF_00570 | P96501 | Positive | 57780 - 59447 | 59529.4 |
| carbon storage regulator | PSDVSF_00580 | C6C0E9 | Positive | 59538 - 59780 | 9238.42 |
| flagellar assembly factor fliw | PSDVSF_00590 | C6C0F0 | Positive | 59780 - 60199 | 15430.6 |
| hypothetical protein | PSDVSF_00600 | Not Available | Negative | 60227 - 60535 | 11347.4 |
| hypothetical protein | PSDVSF_00610 | Not Available | Negative | 60563 - 60973 | 15550.7 |
| hypothetical protein | PSDVSF_00620 | Not Available | Positive | 61213 - 62976 | 67642.2 |
| transglycosylase | PSDVSF_00630 | Q9KPQ4 | Positive | 63030 - 64403 | 50562.5 |
| hypothetical protein | PSDVSF_00640 | Not Available | Positive | 64396 - 65040 | 24687.3 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | PSDVSF_00650 | C4XIR3 | Positive | 65049 - 66482 | 53043.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
