Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf389 domain-containing protein | PSDVSF_12170 | Q58091 | Positive | 1264187 - 1265224 | 37444.2 |
| hypothetical protein | PSDVSF_12180 | D4GU63 | Positive | 1265636 - 1266379 | 28014.7 |
| transport permease protein | PSDVSF_12190 | Q48475 | Positive | 1266828 - 1267598 | 29332.6 |
| hypothetical protein | PSDVSF_12200 | Q48479 | Positive | 1267595 - 1268308 | 25660.2 |
| glycosyl transferase | PSDVSF_12210 | P9WMY2 | Positive | 1268393 - 1269385 | 36703.9 |
| hypothetical protein | PSDVSF_12220 | O58549 | Positive | 1269721 - 1271115 | 52755.3 |
| hypothetical protein | PSDVSF_12230 | O06484 | Negative | 1271166 - 1272206 | 40066.3 |
| hypothetical protein | PSDVSF_12240 | J4KLK4 | Negative | 1272423 - 1275776 | 125249.0 |
| esterase | PSDVSF_12250 | Q566U4 | Negative | 1276231 - 1277100 | 32481.2 |
| hypothetical protein | PSDVSF_12260 | P40194 | Positive | 1277213 - 1277587 | 14282.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
