Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein asma | PSDVSF_11280 | P28249 | Negative | 1163065 - 1165209 | 75826.8 |
| hypothetical protein | PSDVSF_11290 | Q50900 | Negative | 1165238 - 1165546 | 12024.5 |
| phenylalanine--trna ligase beta subunit | PSDVSF_11300 | Q728S0 | Negative | 1165667 - 1168066 | 88504.8 |
| phenylalanine--trna ligase alpha subunit | PSDVSF_11310 | Q728R9 | Negative | 1168147 - 1169199 | 38566.4 |
| 50s ribosomal protein l20 | PSDVSF_11320 | Q728R8 | Negative | 1169203 - 1169556 | 13462.9 |
| 50s ribosomal protein l35 | PSDVSF_11330 | B8J4E2 | Negative | 1169736 - 1169933 | 7560.49 |
| translation initiation factor if-3 | PSDVSF_11340 | Q728R6 | Negative | 1169973 - 1170440 | 17837.9 |
| threonine--trna ligase | PSDVSF_11350 | C6BRH1 | Negative | 1170505 - 1172442 | 73065.2 |
| Trna-val | Not Available | Not Available | Positive | 1172531 - 1172605 | Not Available |
| pbs lyase | PSDVSF_11360 | Not Available | Negative | 1172863 - 1173552 | 25954.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
