Pseudodesulfovibrio sediminis SF6

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio sediminis SF6 is a Gram-negative bacterium characterized by its curved to spiral shape. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability in various environments. The complete genome of P. sediminis SF6 is accessible under the accession number AP024485.1. As a member of the Pseudodesulfovibrio genus, P. sediminis SF6 is likely involved in anaerobic processes, particularly in the reduction of sulfate, which is a common metabolic pathway among sulfate-reducing bacteria. This metabolic capability is significant in biogeochemical cycles, notably in sedimentary environments where sulfate is available as a terminal electron acceptor. The ecological role of Pseudodesulfovibrio sediminis SF6 may extend to its contribution in organic matter decomposition and nutrient cycling in its native habitat. By participating in sulfate reduction, this bacterium can influence the dynamics of microbial communities and the overall health of sediment ecosystems. Understanding the traits and functions of P. sediminis SF6 can provide insights into the complexities of microbial interactions and their ecological implications in sedimentary environments.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio sediminis
StrainSF6

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio sediminis SF6, Complete Genome

Gene Summary

Adenine Count

866846 bp

Thymine Count

863817 bp

Guanine Count

1016377 bp

Cytosine Count

1017110 bp

Genome Length

3764150 bp

Protein-coding Genes

3514 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imp cyclohydrolasePSDVSF_11180Q5FIV5Negative1154932 - 115552821544.0
hypothetical proteinPSDVSF_11190Not AvailablePositive1155672 - 11558938630.12
hypothetical proteinPSDVSF_11200Q96RK4Negative1156099 - 115666220906.0
flagellar basal body rod protein flgbPSDVSF_11210C8BKB7Positive1157105 - 115751515196.2
flagellar basal-body rod protein flgcPSDVSF_11220Q57466Positive1157516 - 115795616379.6
flagellar hook-basal body complex protein fliePSDVSF_11230Q9X186Positive1157971 - 115830312517.3
flagellar m-ring proteinPSDVSF_11240Q04954Positive1158358 - 115995358907.0
flagellar motor switch protein fligPSDVSF_11250Q9WY63Positive1159957 - 116095536758.4
hypothetical proteinPSDVSF_11260Q01253Positive1160942 - 116169127696.7
flagellum-specific atp synthase fliiPSDVSF_11270P23445Positive1161695 - 116306849024.5

Displaying genes 1181 – 1190 of 3617 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.