Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Pseudodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Pseudodesulfovibrio |
| Species | Pseudodesulfovibrio sediminis |
| Strain | SF6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
866846 bp
Thymine Count
863817 bp
Guanine Count
1016377 bp
Cytosine Count
1017110 bp
Genome Length
3764150 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
103 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase | PSDVSF_10780 | Q48214 | Positive | 1111547 - 1112455 | 33600.3 |
| radical sam protein | PSDVSF_10790 | Q51741 | Negative | 1112463 - 1113791 | 49754.6 |
| hypothetical protein | PSDVSF_10800 | Q9PJK3 | Negative | 1113947 - 1114267 | 12079.3 |
| hypothetical protein | PSDVSF_10810 | P25852 | Negative | 1114413 - 1117274 | 105463.0 |
| hypothetical protein | PSDVSF_10820 | Not Available | Positive | 1117425 - 1117667 | 8690.06 |
| hypothetical protein | PSDVSF_10830 | O25918 | Positive | 1117862 - 1118251 | 14353.8 |
| glycosyl transferase | PSDVSF_10840 | Q58469 | Positive | 1118276 - 1119532 | 47473.9 |
| peptidyl-prolyl cis-trans isomerase | PSDVSF_10850 | Q8YHB5 | Positive | 1119551 - 1120096 | 19696.7 |
| amp-binding protein | PSDVSF_10860 | Q8LPS1 | Negative | 1120166 - 1121995 | 67690.8 |
| racemase | PSDVSF_10870 | A0A0H3JGH6 | Negative | 1122153 - 1122842 | 24858.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
